RNA–Protein interactions for RNA: ENST00000565117.1

POLR3E-213, Transcript of RNA polymerase III subunit E, humanhuman

TSL 2

Gene POLR3E, Length 1,549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-213ENST00000565117 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
POLR3E-213ENST00000565117 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
POLR3E-213ENST00000565117 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
POLR3E-213ENST00000565117 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
POLR3E-213ENST00000565117 FOXD1Q16676 465 aa20.42■□□□□ 0.86
POLR3E-213ENST00000565117 NISCHQ9Y2I1 1504 aa19.59■□□□□ 0.73
POLR3E-213ENST00000565117 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
POLR3E-213ENST00000565117 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
POLR3E-213ENST00000565117 ADRA2BP18089 450 aa19.08■□□□□ 0.64
POLR3E-213ENST00000565117 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
POLR3E-213ENST00000565117 MSH5O43196 834 aa19.06■□□□□ 0.64
POLR3E-213ENST00000565117 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
POLR3E-213ENST00000565117 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
POLR3E-213ENST00000565117 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
POLR3E-213ENST00000565117 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
POLR3E-213ENST00000565117 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
POLR3E-213ENST00000565117 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
POLR3E-213ENST00000565117 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
POLR3E-213ENST00000565117 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
POLR3E-213ENST00000565117 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
POLR3E-213ENST00000565117 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
POLR3E-213ENST00000565117 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
POLR3E-213ENST00000565117 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
POLR3E-213ENST00000565117 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
POLR3E-213ENST00000565117 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
POLR3E-213ENST00000565117 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
POLR3E-213ENST00000565117 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
POLR3E-213ENST00000565117 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.18
POLR3E-213ENST00000565117 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
POLR3E-213ENST00000565117 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
POLR3E-213ENST00000565117 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.16
POLR3E-213ENST00000565117 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
POLR3E-213ENST00000565117 ABCC9O60706 1549 aa15.98■□□□□ 0.15
POLR3E-213ENST00000565117 KCNA4P22459 653 aa15.96■□□□□ 0.15
POLR3E-213ENST00000565117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
POLR3E-213ENST00000565117 NACADO15069 1562 aa15.85■□□□□ 0.13
POLR3E-213ENST00000565117 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
POLR3E-213ENST00000565117 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
POLR3E-213ENST00000565117 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
POLR3E-213ENST00000565117 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
POLR3E-213ENST00000565117 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
POLR3E-213ENST00000565117 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
POLR3E-213ENST00000565117 CAPN15O75808 1086 aa15.37■□□□□ 0.05
POLR3E-213ENST00000565117 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
POLR3E-213ENST00000565117 DSG3P32926 999 aa15.27■□□□□ 0.03
POLR3E-213ENST00000565117 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
POLR3E-213ENST00000565117 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
POLR3E-213ENST00000565117 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
POLR3E-213ENST00000565117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
POLR3E-213ENST00000565117 APLP2Q06481 763 aa15.17■□□□□ 0.02
POLR3E-213ENST00000565117 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
POLR3E-213ENST00000565117 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
POLR3E-213ENST00000565117 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
POLR3E-213ENST00000565117 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
POLR3E-213ENST00000565117 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
POLR3E-213ENST00000565117 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
POLR3E-213ENST00000565117 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
POLR3E-213ENST00000565117 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
POLR3E-213ENST00000565117 ABCB7O75027 752 aa15.02□□□□□ -0.01
POLR3E-213ENST00000565117 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
POLR3E-213ENST00000565117 SMARCA4P51532 1647 aa15□□□□□ -0.01
POLR3E-213ENST00000565117 WIZO95785 1651 aa14.97□□□□□ -0.01
POLR3E-213ENST00000565117 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
POLR3E-213ENST00000565117 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
POLR3E-213ENST00000565117 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
POLR3E-213ENST00000565117 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
POLR3E-213ENST00000565117 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
POLR3E-213ENST00000565117 POLA2Q14181 598 aa14.74□□□□□ -0.05
POLR3E-213ENST00000565117 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
POLR3E-213ENST00000565117 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
POLR3E-213ENST00000565117 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
POLR3E-213ENST00000565117 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
POLR3E-213ENST00000565117 ZBTB22O15209 634 aa14.66□□□□□ -0.06
POLR3E-213ENST00000565117 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
POLR3E-213ENST00000565117 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
POLR3E-213ENST00000565117 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
POLR3E-213ENST00000565117 POTEHQ6S545 545 aa14.56□□□□□ -0.08
POLR3E-213ENST00000565117 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
POLR3E-213ENST00000565117 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
POLR3E-213ENST00000565117 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
POLR3E-213ENST00000565117 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
POLR3E-213ENST00000565117 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
POLR3E-213ENST00000565117 CFTRP13569 1480 aa14.35□□□□□ -0.11
POLR3E-213ENST00000565117 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
POLR3E-213ENST00000565117 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
POLR3E-213ENST00000565117 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
POLR3E-213ENST00000565117 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
POLR3E-213ENST00000565117 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
POLR3E-213ENST00000565117 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
POLR3E-213ENST00000565117 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
POLR3E-213ENST00000565117 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
POLR3E-213ENST00000565117 EEA1Q15075 1411 aa14.21□□□□□ -0.13
POLR3E-213ENST00000565117 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
POLR3E-213ENST00000565117 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
POLR3E-213ENST00000565117 SOGA1O94964 1423 aa14.18□□□□□ -0.14
POLR3E-213ENST00000565117 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
POLR3E-213ENST00000565117 CUX1P39880 1505 aa14.13□□□□□ -0.15
POLR3E-213ENST00000565117 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
POLR3E-213ENST00000565117 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
POLR3E-213ENST00000565117 RUSC2Q8N2Y8 1516 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms