Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLIRPQ9GZT3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.89■□□□□ 0.3
SLIRPQ9GZT3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.89■□□□□ 0.3
SLIRPQ9GZT3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
SLIRPQ9GZT3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 TPRG1LP1-201ENST00000598702 760 ntBASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 AL355001.2-201ENST00000620617 1191 ntBASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 AC083906.6-201ENST00000641366 219 ntBASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLIRPQ9GZT3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLIRPQ9GZT3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 AC108860.2-201ENST00000562760 2183 ntBASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 MIR4767-201ENST00000582827 78 ntBASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLIRPQ9GZT3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms