Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 FP475955.4-201ENST00000623131 1990 ntBASIC22.72■■□□□ 1.23
NEK1Q96PY6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NEK1Q96PY6 FEM1AP3-201ENST00000403722 1741 ntBASIC22.71■■□□□ 1.23
NEK1Q96PY6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.71■■□□□ 1.23
NEK1Q96PY6 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.71■■□□□ 1.23
NEK1Q96PY6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
NEK1Q96PY6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
NEK1Q96PY6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 AL353807.1-201ENST00000427475 662 ntBASIC22.7■■□□□ 1.22
NEK1Q96PY6 GCSHP5-201ENST00000443090 522 ntBASIC22.7■■□□□ 1.22
NEK1Q96PY6 KSR1P1-201ENST00000446298 240 ntBASIC22.7■■□□□ 1.22
NEK1Q96PY6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 AF186192.3-201ENST00000583427 947 ntBASIC22.7■■□□□ 1.22
NEK1Q96PY6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 AC131212.4-201ENST00000623606 975 ntBASIC22.7■■□□□ 1.22
NEK1Q96PY6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.7■■□□□ 1.22
NEK1Q96PY6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NEK1Q96PY6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 TSPY21P-201ENST00000433481 731 ntBASIC22.69■■□□□ 1.22
NEK1Q96PY6 TSPY23P-201ENST00000440136 739 ntBASIC22.69■■□□□ 1.22
NEK1Q96PY6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NEK1Q96PY6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK1Q96PY6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.68■■□□□ 1.22
NEK1Q96PY6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.68■■□□□ 1.22
NEK1Q96PY6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
NEK1Q96PY6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK1Q96PY6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms