Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BRF1Q92994 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BRF1Q92994 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BRF1Q92994 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
BRF1Q92994 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BRF1Q92994 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
BRF1Q92994 ABHD17AP1-201ENST00000358206 933 ntBASIC22.58■■□□□ 1.21
BRF1Q92994 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.58■■□□□ 1.21
BRF1Q92994 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.58■■□□□ 1.21
BRF1Q92994 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.58■■□□□ 1.21
BRF1Q92994 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.58■■□□□ 1.21
BRF1Q92994 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.58■■□□□ 1.21
BRF1Q92994 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
BRF1Q92994 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
BRF1Q92994 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
BRF1Q92994 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
BRF1Q92994 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
BRF1Q92994 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.2
BRF1Q92994 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.57■■□□□ 1.2
BRF1Q92994 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
BRF1Q92994 KRT8P41-201ENST00000533985 1514 ntBASIC22.57■■□□□ 1.2
BRF1Q92994 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
BRF1Q92994 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
BRF1Q92994 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 NIFKP9-201ENST00000419265 221 ntBASIC22.57■■□□□ 1.2
BRF1Q92994 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.57■■□□□ 1.2
BRF1Q92994 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 RPS2P4-201ENST00000476944 856 ntBASIC22.57■■□□□ 1.2
BRF1Q92994 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.57■■□□□ 1.2
BRF1Q92994 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
BRF1Q92994 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.57■■□□□ 1.2
BRF1Q92994 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.57■■□□□ 1.2
BRF1Q92994 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.57■■□□□ 1.2
BRF1Q92994 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
BRF1Q92994 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRF1Q92994 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
BRF1Q92994 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 FP475955.4-201ENST00000623131 1990 ntBASIC22.56■■□□□ 1.2
BRF1Q92994 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
BRF1Q92994 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
BRF1Q92994 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.56■■□□□ 1.2
BRF1Q92994 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.56■■□□□ 1.2
BRF1Q92994 Z85996.1-201ENST00000494644 937 ntBASIC22.56■■□□□ 1.2
BRF1Q92994 AL445675.2-201ENST00000620291 557 ntBASIC22.56■■□□□ 1.2
BRF1Q92994 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRF1Q92994 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
BRF1Q92994 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
BRF1Q92994 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
BRF1Q92994 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.55■■□□□ 1.2
BRF1Q92994 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 AP002982.1-201ENST00000492365 877 ntBASIC22.55■■□□□ 1.2
BRF1Q92994 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.55■■□□□ 1.2
BRF1Q92994 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 AC142381.4-202ENST00000563973 229 ntBASIC22.55■■□□□ 1.2
BRF1Q92994 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.55■■□□□ 1.2
BRF1Q92994 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 AL353708.3-201ENST00000610272 989 ntBASIC22.55■■□□□ 1.2
BRF1Q92994 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.55■■□□□ 1.2
BRF1Q92994 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
BRF1Q92994 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRF1Q92994 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.55■■□□□ 1.2
BRF1Q92994 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRF1Q92994 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BRF1Q92994 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.54■■□□□ 1.2
BRF1Q92994 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
BRF1Q92994 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRF1Q92994 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms