Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB40AQ8WXH6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 AC104581.1-202ENST00000635932 2618 ntBASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40AQ8WXH6 AC141586.3-201ENST00000562166 1838 ntBASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 HLA-B-256ENST00000639848 1089 ntBASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 PHGDH-210ENST00000641115 1638 ntBASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40AQ8WXH6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40AQ8WXH6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40AQ8WXH6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.83■□□□□ 0.29
RAB40AQ8WXH6 BCL2-203ENST00000589955 5011 ntBASIC16.83■□□□□ 0.29
RAB40AQ8WXH6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40AQ8WXH6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms