Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB43Q86YS6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB43Q86YS6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB43Q86YS6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB43Q86YS6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB43Q86YS6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB43Q86YS6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB43Q86YS6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB43Q86YS6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 AC113347.1-201ENST00000413321 391 ntBASIC18.29■□□□□ 0.52
RAB43Q86YS6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB43Q86YS6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB43Q86YS6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 AC004980.1-204ENST00000429707 299 ntBASIC18.28■□□□□ 0.52
RAB43Q86YS6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 B3GAT3P1-201ENST00000471720 806 ntBASIC18.28■□□□□ 0.52
RAB43Q86YS6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.28■□□□□ 0.52
RAB43Q86YS6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB43Q86YS6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RAB43Q86YS6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB43Q86YS6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB43Q86YS6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms