Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H2AQ7L7L0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2AQ7L7L0 AP000974.1-201ENST00000623909 2387 ntBASIC17.5■□□□□ 0.39
HIST3H2AQ7L7L0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 ID1-201ENST00000376105 1233 ntBASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 POM121L13P-201ENST00000422362 380 ntBASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 UNC93B5-201ENST00000530315 699 ntBASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2AQ7L7L0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2AQ7L7L0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 LINC01465-201ENST00000408887 1940 ntBASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 KRT18P16-201ENST00000510337 1294 ntBASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 RNA5SP413-201ENST00000516373 109 ntBASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2AQ7L7L0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HIST3H2AQ7L7L0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HIST3H2AQ7L7L0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H2AQ7L7L0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms