Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 AL035685.1-201ENST00000636663 812 ntBASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00173Q6ZV60 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 AC131281.2-201ENST00000520478 145 ntBASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 AC134043.2-201ENST00000624206 2238 ntBASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00173Q6ZV60 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
LINC00173Q6ZV60 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 KRT16P2-201ENST00000414673 1423 ntBASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00173Q6ZV60 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00173Q6ZV60 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms