Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX4Q33E94 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX4Q33E94 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX4Q33E94 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 C2orf69P4-201ENST00000565394 541 ntBASIC17.85■□□□□ 0.45
RFX4Q33E94 RARRES2P6-201ENST00000567333 442 ntBASIC17.85■□□□□ 0.45
RFX4Q33E94 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 AL589743.5-201ENST00000616611 1050 ntBASIC17.85■□□□□ 0.45
RFX4Q33E94 BID-214ENST00000617586 542 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX4Q33E94 OR10C1-204ENST00000622521 1039 ntBASIC17.85■□□□□ 0.45
RFX4Q33E94 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.85■□□□□ 0.45
RFX4Q33E94 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX4Q33E94 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX4Q33E94 FP475955.4-201ENST00000623131 1990 ntBASIC17.84■□□□□ 0.45
RFX4Q33E94 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX4Q33E94 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX4Q33E94 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 AL133373.2-201ENST00000623187 2828 ntBASIC17.84■□□□□ 0.45
RFX4Q33E94 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 AC007322.1-201ENST00000426983 750 ntBASIC17.84■□□□□ 0.45
RFX4Q33E94 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX4Q33E94 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 AL512353.2-201ENST00000448759 1962 ntBASIC17.84■□□□□ 0.45
RFX4Q33E94 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX4Q33E94 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX4Q33E94 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.83■□□□□ 0.45
RFX4Q33E94 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
RFX4Q33E94 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.83■□□□□ 0.45
RFX4Q33E94 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
RFX4Q33E94 AC010980.2-201ENST00000587099 1412 ntBASIC17.83■□□□□ 0.45
RFX4Q33E94 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX4Q33E94 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.83■□□□□ 0.45
RFX4Q33E94 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.83■□□□□ 0.44
RFX4Q33E94 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.83■□□□□ 0.44
RFX4Q33E94 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.83■□□□□ 0.44
RFX4Q33E94 AC026271.2-201ENST00000428091 497 ntBASIC17.83■□□□□ 0.44
RFX4Q33E94 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.83■□□□□ 0.44
RFX4Q33E94 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.83■□□□□ 0.44
RFX4Q33E94 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.83■□□□□ 0.44
RFX4Q33E94 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.83■□□□□ 0.44
RFX4Q33E94 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.83■□□□□ 0.44
RFX4Q33E94 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.83■□□□□ 0.44
RFX4Q33E94 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RFX4Q33E94 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX4Q33E94 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RFX4Q33E94 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RFX4Q33E94 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFX4Q33E94 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.83■□□□□ 0.44
RFX4Q33E94 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFX4Q33E94 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX4Q33E94 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX4Q33E94 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFX4Q33E94 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms