Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.27■□□□□ 0.68
LSP1P33241 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.27■□□□□ 0.68
LSP1P33241 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.27■□□□□ 0.68
LSP1P33241 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
LSP1P33241 AL139246.5-201ENST00000606645 996 ntBASIC19.27■□□□□ 0.68
LSP1P33241 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.27■□□□□ 0.68
LSP1P33241 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSP1P33241 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.27■□□□□ 0.67
LSP1P33241 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSP1P33241 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.27■□□□□ 0.67
LSP1P33241 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
LSP1P33241 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.27■□□□□ 0.67
LSP1P33241 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LSP1P33241 AC134043.2-201ENST00000624206 2238 ntBASIC19.27■□□□□ 0.67
LSP1P33241 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.27■□□□□ 0.67
LSP1P33241 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.26■□□□□ 0.67
LSP1P33241 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 PBX2P1-201ENST00000493219 1291 ntBASIC19.26■□□□□ 0.67
LSP1P33241 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.26■□□□□ 0.67
LSP1P33241 AC012414.1-201ENST00000556676 535 ntBASIC19.26■□□□□ 0.67
LSP1P33241 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.26■□□□□ 0.67
LSP1P33241 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LSP1P33241 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LSP1P33241 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LSP1P33241 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
LSP1P33241 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.26■□□□□ 0.67
LSP1P33241 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSP1P33241 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.25■□□□□ 0.67
LSP1P33241 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.25■□□□□ 0.67
LSP1P33241 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.25■□□□□ 0.67
LSP1P33241 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.25■□□□□ 0.67
LSP1P33241 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L2-201ENST00000561772 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.25■□□□□ 0.67
LSP1P33241 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L6-201ENST00000626483 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L1-201ENST00000627662 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L8-201ENST00000629013 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L3-201ENST00000630187 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L7-201ENST00000630678 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 DUX4L5-201ENST00000630834 1275 ntBASIC19.25■□□□□ 0.67
LSP1P33241 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.25■□□□□ 0.67
LSP1P33241 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LSP1P33241 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.25■□□□□ 0.67
LSP1P33241 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.25■□□□□ 0.67
LSP1P33241 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSP1P33241 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LSP1P33241 GNAS-203ENST00000306120 1878 ntBASIC19.24■□□□□ 0.67
LSP1P33241 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LSP1P33241 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSP1P33241 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms