Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM17P0DL12 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM17P0DL12 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM17P0DL12 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SMIM17P0DL12 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
SMIM17P0DL12 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.27□□□□□ -0.12
SMIM17P0DL12 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SMIM17P0DL12 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM17P0DL12 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SMIM17P0DL12 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.27□□□□□ -0.13
SMIM17P0DL12 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 MYCNOS-205ENST00000641950 531 ntBASIC14.27□□□□□ -0.13
SMIM17P0DL12 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM17P0DL12 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM17P0DL12 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM17P0DL12 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM17P0DL12 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM17P0DL12 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 UBE2DNL-204ENST00000602536 740 ntBASIC14.26□□□□□ -0.13
SMIM17P0DL12 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM17P0DL12 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM17P0DL12 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 TERF1P5-201ENST00000477545 1207 ntBASIC14.25□□□□□ -0.13
SMIM17P0DL12 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 AC005837.3-201ENST00000612163 286 ntBASIC14.25□□□□□ -0.13
SMIM17P0DL12 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SMIM17P0DL12 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM17P0DL12 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms