Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
UPK1BO75841 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1BO75841 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1BO75841 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
UPK1BO75841 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1BO75841 AC092171.4-201ENST00000609130 632 ntBASIC16.75■□□□□ 0.27
UPK1BO75841 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.75■□□□□ 0.27
UPK1BO75841 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 KRT8P33-201ENST00000508125 1423 ntBASIC16.75■□□□□ 0.27
UPK1BO75841 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1BO75841 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.75■□□□□ 0.27
UPK1BO75841 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
UPK1BO75841 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.75■□□□□ 0.27
UPK1BO75841 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPK1BO75841 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.74■□□□□ 0.27
UPK1BO75841 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UPK1BO75841 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
UPK1BO75841 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
UPK1BO75841 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.74■□□□□ 0.27
UPK1BO75841 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.74■□□□□ 0.27
UPK1BO75841 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.74■□□□□ 0.27
UPK1BO75841 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UPK1BO75841 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.74■□□□□ 0.27
UPK1BO75841 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1BO75841 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UPK1BO75841 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
UPK1BO75841 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
UPK1BO75841 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1BO75841 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UPK1BO75841 KRT16P2-201ENST00000414673 1423 ntBASIC16.73■□□□□ 0.27
UPK1BO75841 KRT8P17-201ENST00000453110 1448 ntBASIC16.73■□□□□ 0.27
UPK1BO75841 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.73■□□□□ 0.27
UPK1BO75841 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1BO75841 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.73■□□□□ 0.27
UPK1BO75841 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1BO75841 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.73■□□□□ 0.27
UPK1BO75841 PTBP1P-201ENST00000554374 1601 ntBASIC16.73■□□□□ 0.27
UPK1BO75841 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1BO75841 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.73■□□□□ 0.27
UPK1BO75841 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1BO75841 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1BO75841 AC108860.2-201ENST00000562760 2183 ntBASIC16.72■□□□□ 0.27
UPK1BO75841 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UPK1BO75841 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1BO75841 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1BO75841 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UPK1BO75841 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1BO75841 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.72■□□□□ 0.27
UPK1BO75841 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 SLC25A6P5-201ENST00000435663 894 ntBASIC16.72■□□□□ 0.27
UPK1BO75841 KRT125P-201ENST00000546827 989 ntBASIC16.72■□□□□ 0.27
UPK1BO75841 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.72■□□□□ 0.27
UPK1BO75841 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UPK1BO75841 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1BO75841 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms