Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 IRX1P1-201ENST00000438849 1838 ntBASIC18.19■□□□□ 0.5
AP4S1Q9Y587 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 ABALON-201ENST00000629058 1903 ntBASIC18.18■□□□□ 0.5
AP4S1Q9Y587 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4S1Q9Y587 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 AL136967.2-201ENST00000623968 743 ntBASIC18.17■□□□□ 0.5
AP4S1Q9Y587 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 ZNF815P-204ENST00000434898 1737 ntBASIC18.17■□□□□ 0.5
AP4S1Q9Y587 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4S1Q9Y587 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.16■□□□□ 0.5
AP4S1Q9Y587 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4S1Q9Y587 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms