Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMSS1Q9BQ75 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 AL138781.2-201ENST00000617896 1843 ntBASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 AL161938.1-201ENST00000569833 2180 ntBASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 AC093787.1-201ENST00000450396 207 ntBASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.4■□□□□ 0.22
CMSS1Q9BQ75 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CMSS1Q9BQ75 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.22
CMSS1Q9BQ75 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CMSS1Q9BQ75 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.39■□□□□ 0.22
CMSS1Q9BQ75 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMSS1Q9BQ75 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 AC141586.3-201ENST00000562166 1838 ntBASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 GPX1P1-201ENST00000388829 606 ntBASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMSS1Q9BQ75 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms