Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 NIFKP9-201ENST00000419265 221 ntBASIC22.76■■□□□ 1.23
NEK1Q96PY6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 FAM197Y4-202ENST00000622692 608 ntBASIC22.76■■□□□ 1.23
NEK1Q96PY6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 AL353708.3-201ENST00000610272 989 ntBASIC22.75■■□□□ 1.23
NEK1Q96PY6 AL445675.2-201ENST00000620291 557 ntBASIC22.75■■□□□ 1.23
NEK1Q96PY6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NEK1Q96PY6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 IRX1P1-201ENST00000438849 1838 ntBASIC22.75■■□□□ 1.23
NEK1Q96PY6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.75■■□□□ 1.23
NEK1Q96PY6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 AC098590.1-201ENST00000468126 897 ntBASIC22.74■■□□□ 1.23
NEK1Q96PY6 RPS2P4-201ENST00000476944 856 ntBASIC22.74■■□□□ 1.23
NEK1Q96PY6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.74■■□□□ 1.23
NEK1Q96PY6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
NEK1Q96PY6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 KRT8P41-201ENST00000533985 1514 ntBASIC22.73■■□□□ 1.23
NEK1Q96PY6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 AP002982.1-201ENST00000492365 877 ntBASIC22.73■■□□□ 1.23
NEK1Q96PY6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 Z85996.1-201ENST00000494644 937 ntBASIC22.73■■□□□ 1.23
NEK1Q96PY6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 AC142381.4-202ENST00000563973 229 ntBASIC22.73■■□□□ 1.23
NEK1Q96PY6 RARRES2P10-201ENST00000564312 460 ntBASIC22.73■■□□□ 1.23
NEK1Q96PY6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 TNXA-203ENST00000507684 2038 ntBASIC22.73■■□□□ 1.23
NEK1Q96PY6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NEK1Q96PY6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
NEK1Q96PY6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 AC004980.1-204ENST00000429707 299 ntBASIC22.72■■□□□ 1.23
NEK1Q96PY6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.72■■□□□ 1.23
NEK1Q96PY6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
NEK1Q96PY6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms