Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.36■■□□□ 1.01
DHX40Q8IX18 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DHX40Q8IX18 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 PCDHB18P-201ENST00000524813 2368 ntBASIC21.35■■□□□ 1.01
DHX40Q8IX18 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 AC133552.2-202ENST00000575694 574 ntBASIC21.35■■□□□ 1.01
DHX40Q8IX18 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
DHX40Q8IX18 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 FEM1AP3-201ENST00000403722 1741 ntBASIC21.35■■□□□ 1.01
DHX40Q8IX18 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DHX40Q8IX18 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.34■■□□□ 1.01
DHX40Q8IX18 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
DHX40Q8IX18 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DHX40Q8IX18 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DHX40Q8IX18 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.34■■□□□ 1.01
DHX40Q8IX18 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DHX40Q8IX18 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DHX40Q8IX18 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.34■■□□□ 1.01
DHX40Q8IX18 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DHX40Q8IX18 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DHX40Q8IX18 KRT8P8-201ENST00000434750 1448 ntBASIC21.34■■□□□ 1.01
DHX40Q8IX18 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DHX40Q8IX18 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 NOC2LP2-201ENST00000407594 1944 ntBASIC21.33■■□□□ 1.01
DHX40Q8IX18 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 ANO7L1-203ENST00000602586 1720 ntBASIC21.33■■□□□ 1.01
DHX40Q8IX18 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DHX40Q8IX18 AL390719.1-204ENST00000412397 1219 ntBASIC21.33■■□□□ 1.01
DHX40Q8IX18 TSPY6P-201ENST00000448518 926 ntBASIC21.33■■□□□ 1.01
DHX40Q8IX18 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.33■■□□□ 1.01
DHX40Q8IX18 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DHX40Q8IX18 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DHX40Q8IX18 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DHX40Q8IX18 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.33■■□□□ 1
DHX40Q8IX18 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms