Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NFE4Q86UQ8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 AL355472.2-201ENST00000422958 438 ntBASIC13.73□□□□□ -0.21
NFE4Q86UQ8 POU5F1P3-201ENST00000428824 1078 ntBASIC13.73□□□□□ -0.21
NFE4Q86UQ8 TSPY20P-201ENST00000450910 630 ntBASIC13.73□□□□□ -0.21
NFE4Q86UQ8 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.73□□□□□ -0.21
NFE4Q86UQ8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 AC105020.6-201ENST00000621523 1217 ntBASIC13.73□□□□□ -0.21
NFE4Q86UQ8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NFE4Q86UQ8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 KRT18P29-201ENST00000397031 1267 ntBASIC13.72□□□□□ -0.21
NFE4Q86UQ8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 AC060766.5-201ENST00000590539 871 ntBASIC13.72□□□□□ -0.21
NFE4Q86UQ8 AC083880.1-201ENST00000608266 535 ntBASIC13.72□□□□□ -0.21
NFE4Q86UQ8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 HLA-B-256ENST00000639848 1089 ntBASIC13.72□□□□□ -0.21
NFE4Q86UQ8 KRT17P1-201ENST00000399211 1546 ntBASIC13.72□□□□□ -0.21
NFE4Q86UQ8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NFE4Q86UQ8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms