Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.37□□□□□ -0.75
LCA10Q71F78 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.36□□□□□ -0.75
LCA10Q71F78 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.36□□□□□ -0.75
LCA10Q71F78 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.36□□□□□ -0.75
LCA10Q71F78 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LCA10Q71F78 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC10.36□□□□□ -0.75
LCA10Q71F78 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC10.36□□□□□ -0.75
LCA10Q71F78 RPP21-222ENST00000433076 577 ntTSL 2 BASIC10.36□□□□□ -0.75
LCA10Q71F78 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC10.36□□□□□ -0.75
LCA10Q71F78 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LCA10Q71F78 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 TRIR-202ENST00000588213 841 ntTSL 3 BASIC10.36□□□□□ -0.75
LCA10Q71F78 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC10.36□□□□□ -0.75
LCA10Q71F78 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
LCA10Q71F78 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LCA10Q71F78 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
LCA10Q71F78 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.36□□□□□ -0.75
LCA10Q71F78 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.36□□□□□ -0.75
LCA10Q71F78 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LCA10Q71F78 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 AC068587.6-202ENST00000641839 5619 ntBASIC10.35□□□□□ -0.75
LCA10Q71F78 STX5-203ENST00000394690 1568 ntTSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
LCA10Q71F78 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC10.35□□□□□ -0.75
LCA10Q71F78 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 SF1-220ENST00000626028 704 ntTSL 2 BASIC10.35□□□□□ -0.75
LCA10Q71F78 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LCA10Q71F78 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms