Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 ZNF815P-204ENST00000434898 1737 ntBASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 KRT17P3-201ENST00000420566 1262 ntBASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 AC233263.1-201ENST00000578059 224 ntBASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR3Q6ZTQ4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 AL390719.1-204ENST00000412397 1219 ntBASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR3Q6ZTQ4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 POM121L13P-201ENST00000422362 380 ntBASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 GCSHP5-201ENST00000443090 522 ntBASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 RPS2P52-201ENST00000469610 820 ntBASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR3Q6ZTQ4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.27■□□□□ 0.67
CDHR3Q6ZTQ4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CDHR3Q6ZTQ4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.27■□□□□ 0.67
CDHR3Q6ZTQ4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDHR3Q6ZTQ4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.27■□□□□ 0.67
CDHR3Q6ZTQ4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR3Q6ZTQ4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms