Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 AC233263.1-201ENST00000578059 224 ntBASIC19.97■□□□□ 0.79
LRRC38Q5VT99 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 AL031598.1-201ENST00000561511 1773 ntBASIC19.97■□□□□ 0.79
LRRC38Q5VT99 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC38Q5VT99 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC38Q5VT99 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 KRT16P5-201ENST00000455284 522 ntBASIC19.95■□□□□ 0.78
LRRC38Q5VT99 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 KRT18P6-201ENST00000555540 1265 ntBASIC19.95■□□□□ 0.78
LRRC38Q5VT99 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC38Q5VT99 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 Z98044.1-201ENST00000632503 1764 ntBASIC19.94■□□□□ 0.78
LRRC38Q5VT99 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC38Q5VT99 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms