Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6AP1LQ52LC2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6AP1LQ52LC2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6AP1LQ52LC2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6AP1LQ52LC2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 NEFHP1-201ENST00000412845 2629 ntBASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 MIR4758-201ENST00000577688 71 ntBASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 HLA-B-256ENST00000639848 1089 ntBASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP6AP1LQ52LC2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP6AP1LQ52LC2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms