Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.53■□□□□ 0.24
AP3S2P59780 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
AP3S2P59780 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3S2P59780 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP3S2P59780 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3S2P59780 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP3S2P59780 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
AP3S2P59780 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S2P59780 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
AP3S2P59780 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.52■□□□□ 0.24
AP3S2P59780 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
AP3S2P59780 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.52■□□□□ 0.24
AP3S2P59780 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP3S2P59780 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 AC099791.1-201ENST00000416440 715 ntBASIC16.52■□□□□ 0.24
AP3S2P59780 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.52■□□□□ 0.24
AP3S2P59780 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.52■□□□□ 0.24
AP3S2P59780 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 KRT18P20-201ENST00000548986 1279 ntBASIC16.52■□□□□ 0.24
AP3S2P59780 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3S2P59780 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.52■□□□□ 0.23
AP3S2P59780 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3S2P59780 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
AP3S2P59780 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3S2P59780 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP3S2P59780 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.51■□□□□ 0.23
AP3S2P59780 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP3S2P59780 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3S2P59780 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP3S2P59780 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3S2P59780 IRX1P1-201ENST00000438849 1838 ntBASIC16.51■□□□□ 0.23
AP3S2P59780 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3S2P59780 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3S2P59780 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3S2P59780 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3S2P59780 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.5■□□□□ 0.23
AP3S2P59780 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3S2P59780 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.5■□□□□ 0.23
AP3S2P59780 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP3S2P59780 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3S2P59780 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3S2P59780 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP3S2P59780 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3S2P59780 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3S2P59780 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.49■□□□□ 0.23
AP3S2P59780 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
AP3S2P59780 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3S2P59780 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms