Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
PMS1P54277 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PMS1P54277 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.16■□□□□ 0.98
PMS1P54277 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.16■□□□□ 0.98
PMS1P54277 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.16■□□□□ 0.98
PMS1P54277 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 AL138781.2-201ENST00000617896 1843 ntBASIC21.16■□□□□ 0.98
PMS1P54277 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PMS1P54277 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.16■□□□□ 0.98
PMS1P54277 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.16■□□□□ 0.98
PMS1P54277 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.16■□□□□ 0.98
PMS1P54277 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.16■□□□□ 0.98
PMS1P54277 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.16■□□□□ 0.98
PMS1P54277 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMS1P54277 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PMS1P54277 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
PMS1P54277 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PMS1P54277 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS1P54277 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.15■□□□□ 0.98
PMS1P54277 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.15■□□□□ 0.98
PMS1P54277 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PMS1P54277 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.15■□□□□ 0.98
PMS1P54277 NEFHP1-201ENST00000412845 2629 ntBASIC21.15■□□□□ 0.98
PMS1P54277 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS1P54277 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PMS1P54277 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS1P54277 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS1P54277 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
PMS1P54277 ESRRAP1-201ENST00000400596 1257 ntBASIC21.15■□□□□ 0.98
PMS1P54277 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.15■□□□□ 0.98
PMS1P54277 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.15■□□□□ 0.98
PMS1P54277 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.15■□□□□ 0.98
PMS1P54277 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.15■□□□□ 0.98
PMS1P54277 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PMS1P54277 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS1P54277 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.15■□□□□ 0.98
PMS1P54277 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PMS1P54277 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMS1P54277 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PMS1P54277 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.14■□□□□ 0.98
PMS1P54277 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
PMS1P54277 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PMS1P54277 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 KRT17P3-201ENST00000420566 1262 ntBASIC21.14■□□□□ 0.97
PMS1P54277 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.14■□□□□ 0.97
PMS1P54277 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
PMS1P54277 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS1P54277 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS1P54277 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS1P54277 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS1P54277 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PMS1P54277 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.14■□□□□ 0.97
PMS1P54277 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PMS1P54277 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PMS1P54277 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.14■□□□□ 0.97
PMS1P54277 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMS1P54277 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PMS1P54277 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
PMS1P54277 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PMS1P54277 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PMS1P54277 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PMS1P54277 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.13■□□□□ 0.97
PMS1P54277 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.13■□□□□ 0.97
PMS1P54277 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.13■□□□□ 0.97
PMS1P54277 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMS1P54277 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PMS1P54277 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 FEM1AP3-201ENST00000403722 1741 ntBASIC21.12■□□□□ 0.97
PMS1P54277 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.12■□□□□ 0.97
PMS1P54277 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms