Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NEK4P51957 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK4P51957 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
NEK4P51957 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK4P51957 TUBB8P6-201ENST00000436895 1288 ntBASIC22.9■■□□□ 1.26
NEK4P51957 AC069152.1-201ENST00000438030 544 ntBASIC22.9■■□□□ 1.26
NEK4P51957 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.9■■□□□ 1.26
NEK4P51957 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.9■■□□□ 1.26
NEK4P51957 AC133041.1-202ENST00000642053 222 ntBASIC22.9■■□□□ 1.26
NEK4P51957 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK4P51957 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK4P51957 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
NEK4P51957 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
NEK4P51957 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
NEK4P51957 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK4P51957 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.89■■□□□ 1.26
NEK4P51957 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK4P51957 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.89■■□□□ 1.26
NEK4P51957 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK4P51957 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.89■■□□□ 1.26
NEK4P51957 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK4P51957 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK4P51957 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.89■■□□□ 1.26
NEK4P51957 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
NEK4P51957 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK4P51957 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
NEK4P51957 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.89■■□□□ 1.25
NEK4P51957 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
NEK4P51957 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
NEK4P51957 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
NEK4P51957 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.89■■□□□ 1.25
NEK4P51957 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.25
NEK4P51957 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.89■■□□□ 1.25
NEK4P51957 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.89■■□□□ 1.25
NEK4P51957 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
NEK4P51957 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
NEK4P51957 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK4P51957 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.89■■□□□ 1.25
NEK4P51957 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK4P51957 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.25
NEK4P51957 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK4P51957 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.89■■□□□ 1.25
NEK4P51957 AC104581.1-202ENST00000635932 2618 ntBASIC22.89■■□□□ 1.25
NEK4P51957 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK4P51957 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK4P51957 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
NEK4P51957 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
NEK4P51957 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
NEK4P51957 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.88■■□□□ 1.25
NEK4P51957 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK4P51957 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.88■■□□□ 1.25
NEK4P51957 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
NEK4P51957 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
NEK4P51957 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
NEK4P51957 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.88■■□□□ 1.25
NEK4P51957 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.88■■□□□ 1.25
NEK4P51957 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.88■■□□□ 1.25
NEK4P51957 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.88■■□□□ 1.25
NEK4P51957 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.88■■□□□ 1.25
NEK4P51957 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.88■■□□□ 1.25
NEK4P51957 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK4P51957 AC020763.4-201ENST00000623414 4170 ntBASIC22.88■■□□□ 1.25
NEK4P51957 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.88■■□□□ 1.25
NEK4P51957 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK4P51957 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK4P51957 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK4P51957 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NEK4P51957 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.87■■□□□ 1.25
NEK4P51957 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.87■■□□□ 1.25
NEK4P51957 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
NEK4P51957 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK4P51957 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms