Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDR1P51861 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21■□□□□ 0.95
CDR1P51861 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDR1P51861 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDR1P51861 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.99■□□□□ 0.95
CDR1P51861 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.99■□□□□ 0.95
CDR1P51861 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.99■□□□□ 0.95
CDR1P51861 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.99■□□□□ 0.95
CDR1P51861 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDR1P51861 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDR1P51861 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.99■□□□□ 0.95
CDR1P51861 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDR1P51861 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDR1P51861 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 KRT16P6-202ENST00000425692 1426 ntBASIC20.98■□□□□ 0.95
CDR1P51861 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR1P51861 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.98■□□□□ 0.95
CDR1P51861 FAM197Y1-201ENST00000421178 764 ntBASIC20.98■□□□□ 0.95
CDR1P51861 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR1P51861 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR1P51861 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR1P51861 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDR1P51861 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR1P51861 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR1P51861 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.98■□□□□ 0.95
CDR1P51861 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDR1P51861 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDR1P51861 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.98■□□□□ 0.95
CDR1P51861 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CDR1P51861 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
CDR1P51861 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.97■□□□□ 0.95
CDR1P51861 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.97■□□□□ 0.95
CDR1P51861 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CDR1P51861 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CDR1P51861 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDR1P51861 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 BX119927.1-201ENST00000636596 1552 ntBASIC20.97■□□□□ 0.95
CDR1P51861 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.97■□□□□ 0.95
CDR1P51861 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDR1P51861 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CDR1P51861 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDR1P51861 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AC026471.1-201ENST00000564629 3026 ntBASIC20.96■□□□□ 0.95
CDR1P51861 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDR1P51861 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AC012618.2-201ENST00000428058 849 ntBASIC20.96■□□□□ 0.95
CDR1P51861 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.96■□□□□ 0.95
CDR1P51861 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.96■□□□□ 0.95
CDR1P51861 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR1P51861 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.96■□□□□ 0.95
CDR1P51861 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.96■□□□□ 0.95
CDR1P51861 AF186192.3-201ENST00000583427 947 ntBASIC20.96■□□□□ 0.95
CDR1P51861 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR1P51861 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.96■□□□□ 0.95
CDR1P51861 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR1P51861 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms