Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MDH1P40925 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.33■□□□□ 0.68
MDH1P40925 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MDH1P40925 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MDH1P40925 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.33■□□□□ 0.68
MDH1P40925 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MDH1P40925 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
MDH1P40925 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MDH1P40925 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 AL162741.1-201ENST00000565563 1558 ntBASIC19.32■□□□□ 0.68
MDH1P40925 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.32■□□□□ 0.68
MDH1P40925 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 AC131281.2-201ENST00000520478 145 ntBASIC19.32■□□□□ 0.68
MDH1P40925 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.32■□□□□ 0.68
MDH1P40925 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.32■□□□□ 0.68
MDH1P40925 AC126763.1-201ENST00000552015 2118 ntBASIC19.32■□□□□ 0.68
MDH1P40925 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.32■□□□□ 0.68
MDH1P40925 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
MDH1P40925 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MDH1P40925 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.32■□□□□ 0.68
MDH1P40925 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.32■□□□□ 0.68
MDH1P40925 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
MDH1P40925 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
MDH1P40925 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MDH1P40925 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MDH1P40925 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.31■□□□□ 0.68
MDH1P40925 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.31■□□□□ 0.68
MDH1P40925 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
MDH1P40925 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MDH1P40925 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
MDH1P40925 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.31■□□□□ 0.68
MDH1P40925 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MDH1P40925 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
MDH1P40925 AC073592.3-201ENST00000625118 1834 ntBASIC19.31■□□□□ 0.68
MDH1P40925 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 HLA-G-202ENST00000376815 851 ntBASIC19.31■□□□□ 0.68
MDH1P40925 HLA-G-203ENST00000376818 1127 ntBASIC19.31■□□□□ 0.68
MDH1P40925 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 AC104187.1-201ENST00000607510 612 ntBASIC19.31■□□□□ 0.68
MDH1P40925 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MDH1P40925 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MDH1P40925 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.31■□□□□ 0.68
MDH1P40925 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MDH1P40925 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.31■□□□□ 0.68
MDH1P40925 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MDH1P40925 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MDH1P40925 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.3■□□□□ 0.68
MDH1P40925 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.3■□□□□ 0.68
MDH1P40925 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.3■□□□□ 0.68
MDH1P40925 AC027682.1-201ENST00000562846 899 ntBASIC19.3■□□□□ 0.68
MDH1P40925 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.3■□□□□ 0.68
MDH1P40925 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.3■□□□□ 0.68
MDH1P40925 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MDH1P40925 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.3■□□□□ 0.68
MDH1P40925 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.3■□□□□ 0.68
MDH1P40925 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MDH1P40925 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms