Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SHC1P29353 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.62■□□□□ 0.41
SHC1P29353 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.62■□□□□ 0.41
SHC1P29353 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.62■□□□□ 0.41
SHC1P29353 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.62■□□□□ 0.41
SHC1P29353 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.62■□□□□ 0.41
SHC1P29353 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.62■□□□□ 0.41
SHC1P29353 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SHC1P29353 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.62■□□□□ 0.41
SHC1P29353 Z82202.1-201ENST00000623446 1880 ntBASIC17.62■□□□□ 0.41
SHC1P29353 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.62■□□□□ 0.41
SHC1P29353 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHC1P29353 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SHC1P29353 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
SHC1P29353 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.61■□□□□ 0.41
SHC1P29353 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.61■□□□□ 0.41
SHC1P29353 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SHC1P29353 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.61■□□□□ 0.41
SHC1P29353 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.61■□□□□ 0.41
SHC1P29353 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SHC1P29353 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SHC1P29353 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHC1P29353 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SHC1P29353 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 NEFHP1-201ENST00000412845 2629 ntBASIC17.6■□□□□ 0.41
SHC1P29353 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 KRT16P5-201ENST00000455284 522 ntBASIC17.6■□□□□ 0.41
SHC1P29353 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.6■□□□□ 0.41
SHC1P29353 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.6■□□□□ 0.41
SHC1P29353 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHC1P29353 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.6■□□□□ 0.41
SHC1P29353 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.6■□□□□ 0.41
SHC1P29353 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHC1P29353 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
SHC1P29353 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 TUBB8P6-201ENST00000436895 1288 ntBASIC17.59■□□□□ 0.41
SHC1P29353 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.59■□□□□ 0.41
SHC1P29353 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 AC004264.1-201ENST00000608354 794 ntBASIC17.59■□□□□ 0.41
SHC1P29353 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SHC1P29353 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.59■□□□□ 0.41
SHC1P29353 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.59■□□□□ 0.41
SHC1P29353 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
SHC1P29353 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.59■□□□□ 0.41
SHC1P29353 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC1P29353 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.58■□□□□ 0.41
SHC1P29353 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.58■□□□□ 0.41
SHC1P29353 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.58■□□□□ 0.41
SHC1P29353 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms