Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP11P24347 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.25■□□□□ 0.51
MMP11P24347 MESTP1-201ENST00000404287 994 ntBASIC18.25■□□□□ 0.51
MMP11P24347 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP11P24347 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP11P24347 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP11P24347 B3GAT3P1-201ENST00000471720 806 ntBASIC18.25■□□□□ 0.51
MMP11P24347 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP11P24347 NAPSB-206ENST00000562112 1266 ntBASIC18.25■□□□□ 0.51
MMP11P24347 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP11P24347 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP11P24347 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
MMP11P24347 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP11P24347 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP11P24347 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP11P24347 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MMP11P24347 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP11P24347 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP11P24347 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.24■□□□□ 0.51
MMP11P24347 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.24■□□□□ 0.51
MMP11P24347 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.24■□□□□ 0.51
MMP11P24347 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.24■□□□□ 0.51
MMP11P24347 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.24■□□□□ 0.51
MMP11P24347 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
MMP11P24347 AL390955.1-201ENST00000428694 934 ntBASIC18.24■□□□□ 0.51
MMP11P24347 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
MMP11P24347 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 HLA-A-209ENST00000638375 975 ntBASIC18.24■□□□□ 0.51
MMP11P24347 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP11P24347 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MMP11P24347 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 AP000974.1-201ENST00000623909 2387 ntBASIC18.23■□□□□ 0.51
MMP11P24347 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP11P24347 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MMP11P24347 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 MIR1224-201ENST00000408193 85 ntBASIC18.23■□□□□ 0.51
MMP11P24347 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MMP11P24347 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.23■□□□□ 0.51
MMP11P24347 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MMP11P24347 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 KRT8P8-201ENST00000434750 1448 ntBASIC18.23■□□□□ 0.51
MMP11P24347 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP11P24347 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP11P24347 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MMP11P24347 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP11P24347 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
MMP11P24347 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP11P24347 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
MMP11P24347 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 LINC01568-207ENST00000641790 1380 ntBASIC18.22■□□□□ 0.51
MMP11P24347 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MMP11P24347 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP11P24347 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MMP11P24347 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MMP11P24347 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms