Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP8P22894 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP8P22894 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.24■□□□□ 0.83
MMP8P22894 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP8P22894 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.24■□□□□ 0.83
MMP8P22894 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.24■□□□□ 0.83
MMP8P22894 RARRES2P10-201ENST00000564312 460 ntBASIC20.24■□□□□ 0.83
MMP8P22894 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP8P22894 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP8P22894 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MMP8P22894 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP8P22894 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 AC004980.1-204ENST00000429707 299 ntBASIC20.23■□□□□ 0.83
MMP8P22894 KSR1P1-201ENST00000446298 240 ntBASIC20.23■□□□□ 0.83
MMP8P22894 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP8P22894 AC098590.1-201ENST00000468126 897 ntBASIC20.23■□□□□ 0.83
MMP8P22894 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP8P22894 AP002982.1-201ENST00000492365 877 ntBASIC20.23■□□□□ 0.83
MMP8P22894 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP8P22894 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP8P22894 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP8P22894 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP8P22894 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP8P22894 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
MMP8P22894 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MMP8P22894 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP8P22894 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 AL353807.1-201ENST00000427475 662 ntBASIC20.22■□□□□ 0.83
MMP8P22894 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP8P22894 TSPY23P-201ENST00000440136 739 ntBASIC20.22■□□□□ 0.83
MMP8P22894 RPS2P4-201ENST00000476944 856 ntBASIC20.22■□□□□ 0.83
MMP8P22894 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP8P22894 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP8P22894 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
MMP8P22894 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP8P22894 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP8P22894 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP8P22894 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP8P22894 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MMP8P22894 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.21■□□□□ 0.83
MMP8P22894 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP8P22894 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP8P22894 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.21■□□□□ 0.83
MMP8P22894 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 AF186192.3-201ENST00000583427 947 ntBASIC20.21■□□□□ 0.83
MMP8P22894 FAM197Y4-202ENST00000622692 608 ntBASIC20.21■□□□□ 0.83
MMP8P22894 AC131212.4-201ENST00000623606 975 ntBASIC20.21■□□□□ 0.83
MMP8P22894 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP8P22894 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
MMP8P22894 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP8P22894 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.21■□□□□ 0.83
MMP8P22894 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP8P22894 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms