Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC104417.2-201ENST00000562989 1793 ntBASIC17.4■□□□□ 0.38
HMGN1P05114 FP475955.4-201ENST00000623131 1990 ntBASIC17.4■□□□□ 0.38
HMGN1P05114 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGN1P05114 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGN1P05114 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGN1P05114 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGN1P05114 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGN1P05114 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN1P05114 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HMGN1P05114 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.39■□□□□ 0.38
HMGN1P05114 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
HMGN1P05114 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGN1P05114 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.39■□□□□ 0.38
HMGN1P05114 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.39■□□□□ 0.38
HMGN1P05114 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGN1P05114 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.39■□□□□ 0.37
HMGN1P05114 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGN1P05114 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGN1P05114 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGN1P05114 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HMGN1P05114 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN1P05114 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN1P05114 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGN1P05114 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGN1P05114 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGN1P05114 MKRN4P-201ENST00000444706 1521 ntBASIC17.38■□□□□ 0.37
HMGN1P05114 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMGN1P05114 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
HMGN1P05114 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGN1P05114 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGN1P05114 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HMGN1P05114 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGN1P05114 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGN1P05114 RAP2CP1-201ENST00000605103 478 ntBASIC17.38■□□□□ 0.37
HMGN1P05114 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN1P05114 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms