Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.25■□□□□ 0.67
GPC4O75487 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
GPC4O75487 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.25■□□□□ 0.67
GPC4O75487 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GPC4O75487 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GPC4O75487 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.25■□□□□ 0.67
GPC4O75487 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.25■□□□□ 0.67
GPC4O75487 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 FAM201B-201ENST00000458407 597 ntBASIC19.25■□□□□ 0.67
GPC4O75487 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
GPC4O75487 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.25■□□□□ 0.67
GPC4O75487 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 HTR7P1-202ENST00000624664 4411 ntBASIC19.25■□□□□ 0.67
GPC4O75487 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
GPC4O75487 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.25■□□□□ 0.67
GPC4O75487 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GPC4O75487 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GPC4O75487 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
GPC4O75487 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
GPC4O75487 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
GPC4O75487 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GPC4O75487 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.24■□□□□ 0.67
GPC4O75487 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 YBX1P10-201ENST00000444752 975 ntBASIC19.24■□□□□ 0.67
GPC4O75487 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.24■□□□□ 0.67
GPC4O75487 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.24■□□□□ 0.67
GPC4O75487 PRKY-204ENST00000533551 1019 ntBASIC19.24■□□□□ 0.67
GPC4O75487 ITM2C-210ENST00000620962 501 ntBASIC19.24■□□□□ 0.67
GPC4O75487 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GPC4O75487 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GPC4O75487 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
GPC4O75487 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GPC4O75487 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GPC4O75487 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.24■□□□□ 0.67
GPC4O75487 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GPC4O75487 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
GPC4O75487 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.23■□□□□ 0.67
GPC4O75487 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.23■□□□□ 0.67
GPC4O75487 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.23■□□□□ 0.67
GPC4O75487 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.23■□□□□ 0.67
GPC4O75487 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GPC4O75487 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GPC4O75487 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC4O75487 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GPC4O75487 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.22■□□□□ 0.67
GPC4O75487 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GPC4O75487 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms