Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 UNC93B5-201ENST00000530315 699 ntBASIC17.8■□□□□ 0.44
ARHGEF9O43307 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 KRT17P1-201ENST00000399211 1546 ntBASIC17.8■□□□□ 0.44
ARHGEF9O43307 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 AC008550.1-201ENST00000511500 884 ntBASIC17.79■□□□□ 0.44
ARHGEF9O43307 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 C2orf69P4-201ENST00000565394 541 ntBASIC17.79■□□□□ 0.44
ARHGEF9O43307 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 LTB4R2-202ENST00000528054 3092 ntBASIC17.79■□□□□ 0.44
ARHGEF9O43307 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.79■□□□□ 0.44
ARHGEF9O43307 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF9O43307 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.78■□□□□ 0.44
ARHGEF9O43307 AC073648.6-201ENST00000641589 218 ntBASIC17.78■□□□□ 0.44
ARHGEF9O43307 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF9O43307 NFIC-211ENST00000641145 8399 ntBASIC17.78■□□□□ 0.44
ARHGEF9O43307 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
ARHGEF9O43307 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF9O43307 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF9O43307 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARHGEF9O43307 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARHGEF9O43307 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ARHGEF9O43307 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARHGEF9O43307 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARHGEF9O43307 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ARHGEF9O43307 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms