Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 ACTG1P22-201ENST00000603793 1099 ntBASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 AC006557.6-201ENST00000623071 864 ntBASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 AL032819.2-201ENST00000624543 2162 ntBASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SPDYE4A6NLX3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 KRT17P2-201ENST00000300992 1314 ntBASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 AC211429.1-201ENST00000415277 523 ntBASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 LINC01023-201ENST00000606054 436 ntBASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SPDYE4A6NLX3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 AC087633.2-202ENST00000565166 1439 ntBASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 AC012618.2-201ENST00000428058 849 ntBASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 AC137695.1-201ENST00000604126 489 ntBASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 AP001412.1-201ENST00000608405 714 ntBASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPDYE4A6NLX3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 AP000997.3-201ENST00000623333 2250 ntBASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SPDYE4A6NLX3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms