Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 AF201337.1-201ENST00000520239 748 ntBASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 MIR5787-201ENST00000611784 55 ntBASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 BX276092.2-201ENST00000417668 665 ntBASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 AC026271.2-201ENST00000428091 497 ntBASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 AC105036.2-201ENST00000569468 176 ntBASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV21A0A0B4J279 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 CROCCP3-202ENST00000420820 1947 ntBASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 AL162430.1-201ENST00000480705 870 ntBASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.29□□□□□ -0.12
TRAV21A0A0B4J279 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms