Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-6A0A0B4J262 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-6A0A0B4J262 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 AC091799.1-201ENST00000422823 811 ntBASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 AC007322.4-201ENST00000509611 723 ntBASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 FAM21FP-204ENST00000608637 956 ntBASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 AC124067.4-201ENST00000519691 2379 ntBASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-6A0A0B4J262 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AC009053.2-201ENST00000563701 2365 ntBASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 PGM5P4-201ENST00000421970 445 ntBASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AL162412.1-201ENST00000567129 965 ntBASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AC069236.1-201ENST00000604339 616 ntBASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-6A0A0B4J262 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV8-6A0A0B4J262 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms