Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC005332.7-201ENST00000614046 2005 ntBASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC007952.6-201ENST00000573168 2673 ntBASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC003957.1-201ENST00000625108 2673 ntBASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 BX088651.1-201ENST00000540551 451 ntBASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC073195.1-201ENST00000607241 877 ntBASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 LINC01465-201ENST00000408887 1940 ntBASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 SDHAP1-207ENST00000440850 2000 ntBASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AL032819.2-201ENST00000624543 2162 ntBASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CD177P1-201ENST00000606252 935 ntBASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC131212.4-201ENST00000623606 975 ntBASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 TSPY15P-201ENST00000457163 923 ntBASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFSF12-TNFSF13A0A0A6YY99 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms