Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRBV20-1A0A075B6N2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 AL118508.1-201ENST00000613502 2345 ntBASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 AL162741.1-201ENST00000565563 1558 ntBASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV20-1A0A075B6N2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 AC022413.1-201ENST00000624602 984 ntBASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV20-1A0A075B6N2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms