Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 MIR1233-2-201ENST00000408138 82 ntBASIC21.81■■□□□ 1.08
TRIM17Q9Y577 MIR1233-1-201ENST00000408722 82 ntBASIC21.81■■□□□ 1.08
TRIM17Q9Y577 TSPY12P-201ENST00000421279 868 ntBASIC21.81■■□□□ 1.08
TRIM17Q9Y577 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 KRT16P4-201ENST00000453883 522 ntBASIC21.81■■□□□ 1.08
TRIM17Q9Y577 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 PLK5-205ENST00000642079 1969 ntBASIC21.81■■□□□ 1.08
TRIM17Q9Y577 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM17Q9Y577 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 AC092865.5-201ENST00000545435 363 ntBASIC21.8■■□□□ 1.08
TRIM17Q9Y577 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM17Q9Y577 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM17Q9Y577 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 AC138894.3-201ENST00000603787 634 ntBASIC21.78■■□□□ 1.08
TRIM17Q9Y577 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM17Q9Y577 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 AL353801.3-201ENST00000609898 542 ntBASIC21.77■■□□□ 1.08
TRIM17Q9Y577 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM17Q9Y577 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM17Q9Y577 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.77■■□□□ 1.07
TRIM17Q9Y577 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM17Q9Y577 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM17Q9Y577 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM17Q9Y577 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms