Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDD3Q9Y3P4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDD3Q9Y3P4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
RHBDD3Q9Y3P4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.87■□□□□ 0.29
RHBDD3Q9Y3P4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.87■□□□□ 0.29
RHBDD3Q9Y3P4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHBDD3Q9Y3P4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 ID1-201ENST00000376105 1233 ntBASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 SOX15-203ENST00000570788 1093 ntBASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RHBDD3Q9Y3P4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 AC120498.8-201ENST00000614275 531 ntBASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 NEFHP1-201ENST00000412845 2629 ntBASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.84■□□□□ 0.29
RHBDD3Q9Y3P4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RHBDD3Q9Y3P4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RHBDD3Q9Y3P4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms