Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 AC097381.1-201ENST00000429019 1296 ntBASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COMMD3Q9UBI1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 PHGDH-210ENST00000641115 1638 ntBASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 AL512353.2-201ENST00000448759 1962 ntBASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.94■□□□□ 0.3
COMMD3Q9UBI1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 CCDC92B-201ENST00000575506 885 ntBASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 AP001160.3-201ENST00000601484 763 ntBASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.93■□□□□ 0.3
COMMD3Q9UBI1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 AL136116.3-201ENST00000402907 1138 ntBASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 AL356441.2-201ENST00000443009 864 ntBASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms