Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 IRX1P1-201ENST00000438849 1838 ntBASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 SDHAP1-207ENST00000440850 2000 ntBASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 FP475955.4-201ENST00000623131 1990 ntBASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42SE2Q9NRR3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 AC009113.1-201ENST00000570267 2443 ntBASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 BX276092.2-201ENST00000417668 665 ntBASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 AF201337.1-201ENST00000520239 748 ntBASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42SE2Q9NRR3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 WIZP1-201ENST00000531444 2299 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 KRT8P8-201ENST00000434750 1448 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AC090164.3-201ENST00000610780 2143 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AC004911.1-201ENST00000416316 871 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 AC026271.2-201ENST00000428091 497 ntBASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC42SE2Q9NRR3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms