Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGAP3Q9NP61 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGAP3Q9NP61 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGAP3Q9NP61 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ARFGAP3Q9NP61 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 AC016405.3-201ENST00000607710 860 ntBASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.56■□□□□ 0.88
ARFGAP3Q9NP61 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 CYP2T1P-201ENST00000432607 1285 ntBASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 AC243732.1-201ENST00000612648 864 ntBASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.55■□□□□ 0.88
ARFGAP3Q9NP61 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARFGAP3Q9NP61 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARFGAP3Q9NP61 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms