Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 RPS2P55-201ENST00000397318 883 ntBASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 AC107956.1-201ENST00000494359 873 ntBASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF4Q9BUZ4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAF4Q9BUZ4 KRT8P36-201ENST00000489121 1440 ntBASIC17.21■□□□□ 0.34
TRAF4Q9BUZ4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.21■□□□□ 0.34
TRAF4Q9BUZ4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 MIR2861-201ENST00000636310 90 ntBASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 AC135050.7-201ENST00000624508 2218 ntBASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAF4Q9BUZ4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 AC023632.3-201ENST00000521633 145 ntBASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 PRKY-204ENST00000533551 1019 ntBASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAF4Q9BUZ4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAF4Q9BUZ4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms