Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP7Q93009 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.02■□□□□ 0.64
USP7Q93009 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
USP7Q93009 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.02■□□□□ 0.64
USP7Q93009 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.02■□□□□ 0.64
USP7Q93009 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
USP7Q93009 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.02■□□□□ 0.64
USP7Q93009 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
USP7Q93009 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
USP7Q93009 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP7Q93009 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP7Q93009 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP7Q93009 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP7Q93009 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
USP7Q93009 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.01■□□□□ 0.63
USP7Q93009 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP7Q93009 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.01■□□□□ 0.63
USP7Q93009 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP7Q93009 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.01■□□□□ 0.63
USP7Q93009 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP7Q93009 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.01■□□□□ 0.63
USP7Q93009 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
USP7Q93009 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP7Q93009 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.01■□□□□ 0.63
USP7Q93009 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP7Q93009 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP7Q93009 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.01■□□□□ 0.63
USP7Q93009 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
USP7Q93009 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP7Q93009 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
USP7Q93009 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19■□□□□ 0.63
USP7Q93009 TMPOP1-202ENST00000424642 1267 ntBASIC19■□□□□ 0.63
USP7Q93009 AP002982.1-201ENST00000492365 877 ntBASIC19■□□□□ 0.63
USP7Q93009 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19■□□□□ 0.63
USP7Q93009 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
USP7Q93009 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19■□□□□ 0.63
USP7Q93009 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
USP7Q93009 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP7Q93009 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP7Q93009 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
USP7Q93009 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
USP7Q93009 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
USP7Q93009 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.99■□□□□ 0.63
USP7Q93009 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 RN7SL850P-201ENST00000579959 291 ntBASIC18.99■□□□□ 0.63
USP7Q93009 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.99■□□□□ 0.63
USP7Q93009 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP7Q93009 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
USP7Q93009 BX323043.1-201ENST00000641006 1765 ntBASIC18.98■□□□□ 0.63
USP7Q93009 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USP7Q93009 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP7Q93009 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms