Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 KRT87P-202ENST00000534226 1464 ntBASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 AL358852.1-201ENST00000623174 1268 ntBASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM11BQ8TCY0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 AC105265.2-201ENST00000467189 838 ntBASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 MIR4767-201ENST00000582827 78 ntBASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM11BQ8TCY0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms