Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 AC097493.4-201ENST00000641197 219 ntBASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.21■□□□□ 0.5
ARHGEF39Q8N4T4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ARHGEF39Q8N4T4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 TSPY23P-201ENST00000440136 739 ntBASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 CKBP1-201ENST00000565489 1086 ntBASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 AC010947.1-201ENST00000623454 693 ntBASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF39Q8N4T4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 AC211429.1-201ENST00000415277 523 ntBASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF39Q8N4T4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms