Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 AC022517.1-201ENST00000592429 346 ntBASIC17.4■□□□□ 0.38
SHFQ7M4L6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHFQ7M4L6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHFQ7M4L6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHFQ7M4L6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHFQ7M4L6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHFQ7M4L6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHFQ7M4L6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SHFQ7M4L6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHFQ7M4L6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.38■□□□□ 0.37
SHFQ7M4L6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms