Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 AL354751.1-201ENST00000412768 1863 ntBASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 TNRC18P3-201ENST00000441896 2691 ntBASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FOXR1Q6PIV2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.02■□□□□ 0.79
FOXR1Q6PIV2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXR1Q6PIV2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXR1Q6PIV2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXR1Q6PIV2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXR1Q6PIV2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXR1Q6PIV2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 AL162412.1-201ENST00000567129 965 ntBASIC20■□□□□ 0.79
FOXR1Q6PIV2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20■□□□□ 0.79
FOXR1Q6PIV2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXR1Q6PIV2 AIRN-201ENST00000601203 4374 ntBASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 AC026366.1-201ENST00000488803 879 ntBASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 AP003097.1-201ENST00000530657 1135 ntBASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 AC073648.6-201ENST00000641589 218 ntBASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 BICD1-207ENST00000551848 1962 ntBASIC19.99■□□□□ 0.79
FOXR1Q6PIV2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms