Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRFAM7AQ494W8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHRFAM7AQ494W8 AC004408.2-201ENST00000623613 2777 ntBASIC16.83■□□□□ 0.29
CHRFAM7AQ494W8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRFAM7AQ494W8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 TREX1-205ENST00000625293 1783 ntBASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 AC097493.4-201ENST00000641197 219 ntBASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHRFAM7AQ494W8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 RCN1P1-201ENST00000400413 996 ntBASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 AC133681.1-201ENST00000465482 601 ntBASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 MTDHP1-201ENST00000605323 784 ntBASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 AL445228.2-201ENST00000605589 952 ntBASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 AC124016.1-201ENST00000609552 612 ntBASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 AL023875.1-201ENST00000640777 796 ntBASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRFAM7AQ494W8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms