Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 SDHAP1-207ENST00000440850 2000 ntBASIC23.34■■□□□ 1.33
RFX7Q2KHR2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RFX7Q2KHR2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 AC116562.4-201ENST00000641316 2276 ntBASIC23.33■■□□□ 1.33
RFX7Q2KHR2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 Z85996.1-201ENST00000494644 937 ntBASIC23.33■■□□□ 1.33
RFX7Q2KHR2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 AL160286.2-201ENST00000567150 934 ntBASIC23.33■■□□□ 1.33
RFX7Q2KHR2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.33■■□□□ 1.33
RFX7Q2KHR2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
RFX7Q2KHR2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RFX7Q2KHR2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
RFX7Q2KHR2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RFX7Q2KHR2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
RFX7Q2KHR2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 KRT18P22-201ENST00000402024 1347 ntBASIC23.32■■□□□ 1.32
RFX7Q2KHR2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 AC008040.2-201ENST00000461049 708 ntBASIC23.32■■□□□ 1.32
RFX7Q2KHR2 KRT18P35-201ENST00000510488 1269 ntBASIC23.32■■□□□ 1.32
RFX7Q2KHR2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFX7Q2KHR2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.31■■□□□ 1.32
RFX7Q2KHR2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 TSPY14P-201ENST00000303979 915 ntBASIC23.3■■□□□ 1.32
RFX7Q2KHR2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 AC096733.2-201ENST00000609937 1394 ntBASIC23.3■■□□□ 1.32
RFX7Q2KHR2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RFX7Q2KHR2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFX7Q2KHR2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms